Our group is happy to present a research published in 2025 in European Journal of Pharmaceutical Sciences
FiBar: A tool for analyzing fiber diameters in complex drug delivery systems from scanning electron microscopy images
Laura Männaste, Marta Putrinš, Dmytro Fishman, Karin Kogermann
Collaboration project between Institute of Pharmacy and Institute of Computer Science at the University of Tartu.
We introduce FiBar, an online platform for automated analysis of fibrous DDSs. FiBar is designed with the focus on user-friendliness, reducing setup time and complexity compared to existing alternatives. Additionally, FiBar incorporates advanced features to correct erroneous measurements. This combination makes FiBar a transformative tool for researchers seeking efficiency, accuracy, and versatility in DDSs characterization.
We evaluated FiBar’s performance against ImageJ’s DiameterJ plugin and GIFT macro, SIMPoly, and manual measurements for the analysis of both synthetic datasets and scanning electron microscopy (SEM) images of electrospun drug-loaded fibers. Our results demonstrated that FiBar consistently delivered more reliable measurements, particularly in cases involving faulty segmentations, where other tools faltered. Additionally, FiBar significantly improved efficiency, achieving an average 2.2x reduction in processing time compared to measuring manually. FiBar enables users to easily and quickly measure, edit, and collect diameters of nano- and microfibers, which is important for the characterization and understanding of DDSs and other biomaterials. This is achieved by employing both classical and artificial intelligence (AI) based solutions to enhance its generalizability.
The tool is accessible online at https://fibar.elixir.ut.ee/.